Stupack Lab
Stupack    Lab

Shiny Apps

Two of the R scripts used in our publications have been published as Shiny Apps and are available for use by scientists and the public.

 

If you wish to analyse the TCGA data to determine which pathways are enriched for gains or losses in genes grouped by signaling pathway, you are looking for HAPTRIG. [1]

 

If you want a tool to visualize regions of chromosomal gain or loss in different cancers, you are looking for CAIRN. [2]

 

1.https://www.nature.com/articles/ncomms14423

2. https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1008558

 

 

 

    Cancer Research                    

In the US, a woman dies of ovarian cancer every 38 minutes. Consider helping us fight this disease.

 

The Stupack Lab

is a part of:

 

UCSD Moores

Cancer Center

The Department of Obstetrics, Gynecology & Reproductive Science

 Division of        Gynecologic Oncology

The Department of Pathology

 

Research

A list of our recent Publications Here